BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F01SP1|AL426235
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1497 1534 0.0
>3x_Contig1497
Length = 11582
Score = 1534 bits (773), Expect = 0.0
Identities = 780/781 (99%), Gaps = 1/781 (0%)
Strand = Plus / Plus
Query: 3 tcattcggattcggagatgcaagcaaggcttgcacggacaaaagtactgttctgatttga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8580 tcattcggattcggagatgcaagcaaggcttgcacggacaaaagtactgttctgatttga 8639
Query: 63 agggcaggtgaccaattatttttcaaaacatcgagacatattctacctaaccgatcgata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8640 agggcaggtgaccaattatttttcaaaacatcgagacatattctacctaaccgatcgata 8699
Query: 123 ttgggatggtatatttttgtcaaaaaccttacctttggtgcttccattggataatcatcc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8700 ttgggatggtatatttttgtcaaaaaccttacctttggtgcttccattggataatcatcc 8759
Query: 183 ggtaggaacaattctagttggaagaccccattttcatagggactttgctgcggaccctct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8760 ggtaggaacaattctagttggaagaccccattttcatagggactttgctgcggaccctct 8819
Query: 243 atcgtcacttggaaataacgtaaattatcctcatgtggttctgcagtgattccggggacc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8820 atcgtcacttggaaataacgtaaattatcctcatgtggttctgcagtgattccggggacc 8879
Query: 303 g-atcgctcactaacctttcagtttcctgtgtaaatgatatttttttttttcttggttag 361
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8880 ggatcgctcactaacctttcagtttcctgtgtaaatgatatttttttttttcttggttag 8939
Query: 362 ttataacgctattaattaatactcagatagaaaagaacgtgtaagtttccaaaaattttc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8940 ttataacgctattaattaatactcagatagaaaagaacgtgtaagtttccaaaaattttc 8999
Query: 422 aacatactttgataattctcttgggtaatgctgccattgtactttgaactgggtgatcgg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9000 aacatactttgataattctcttgggtaatgctgccattgtactttgaactgggtgatcgg 9059
Query: 482 tactcgatccgccgtagaaaatcaggaatagatcctgattttaaaaagggttaaagcttt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9060 tactcgatccgccgtagaaaatcaggaatagatcctgattttaaaaagggttaaagcttt 9119
Query: 542 tagtgccttaaatgccttcaagacctttaatatgaaactattcgatatcgaaaaagacaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9120 tagtgccttaaatgccttcaagacctttaatatgaaactattcgatatcgaaaaagacaa 9179
Query: 602 tgcgaagtcacgtgatacttcatcatcatcatcatcatcatcacaggacagtataccgtc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9180 tgcgaagtcacgtgatacttcatcatcatcatcatcatcatcacaggacagtataccgtc 9239
Query: 662 catgttgatgactgtcagagaaaggtatataaagactgataaaaaaaccttttgaaaatg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240 catgttgatgactgtcagagaaaggtatataaagactgataaaaaaaccttttgaaaatg 9299
Query: 722 cgaaaaacctcttcattaaaaagactactaatgtcctcccattagagctttagtattata 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9300 cgaaaaacctcttcattaaaaagactactaatgtcctcccattagagctttagtattata 9359
Query: 782 t 782
|
Sbjct: 9360 t 9360
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,415
Number of Sequences: 1807
Number of extensions: 13415
Number of successful extensions: 446
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)